SUPERFAMILY 1.73 HMM library and genome assignments server

Domain assignment for gi|16129931|ref|NP_416494.1| from Escherichia coli K-12 subMG1655

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|16129931|ref|NP_416494.1|
Domain Number 1 Region: 89-145,174-232
Classification Level Classification E-value
Superfamily L,D-transpeptidase catalytic domain-like 5.5e-29
Family L,D-transpeptidase catalytic domain-like 0.00088
Further Details:      
 

Protein sequence

External link(s) gi|16129931|ref|NP_416494.1|
Sequence length 310
Comment L,D-transpeptidase linking Lpp to murein [Escherichia coli str. K-12 substr. MG1655]
Sequence
MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQG
LSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVF
PIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLY
AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTE
PDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPV
QISSGSRQMF
Download sequence
Identical sequences B1X6S8 B7MWC2 P39176
gi|254161987|ref|YP_003045095.1| gi|238901184|ref|YP_002926980.1| gi|170081622|ref|YP_001730942.1| gi|89108811|ref|AP_002591.1| ERFK_ECOLI gi|251785373|ref|YP_002999677.1| gi|218690048|ref|YP_002398260.1|

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